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High-throughput sequencing of small RNAs and analysis of differentially expressed microRNAs associated with pistil development in Japanese apricot |
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|---|---|
| PubMed ID | 22863067 |
| Authors | Gao Z, Shi T, Luo X, Zhang Z, Zhuang W, Wang L |
| Journal | BMC Genomics |
| Volume | 13 |
| Pages | 371 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| ppe-MIR6257 | MI0021607 | None | chrG3 | 708414 | 708525 | - | Low |
| ppe-MIR6258 | MI0021608 | None | chrG1 | 230371 | 230542 | + | Medium |
| ppe-MIR482a | MI0021609 | None | chrG1 | 30620009 | 30620128 | + | High |
| ppe-MIR482b | MI0021610 | None | chrG1 | 30622467 | 30622602 | + | High |
| ppe-MIR171f | MI0021611 | None | chrG1 | 33174516 | 33174603 | + | High |
| ppe-MIR6259 | MI0021612 | None | chrG1 | 38380122 | 38380247 | + | Low |
| ppe-MIR6260 | MI0021613 | None | chrG1 | 41542961 | 41543062 | + | - |
| ppe-MIR6261 | MI0021614 | None | chrG1 | 43423620 | 43423693 | - | - |
| ppe-MIR6262 | MI0021615 | None | chrG1 | 24878869 | 24879054 | - | - |
| ppe-MIR394a | MI0021616 | None | chrG1 | 33109945 | 33110088 | - | Low |
| ppe-MIR6263 | MI0021617 | None | chrG2 | 20351138 | 20351244 | + | - |
| ppe-MIR6264 | MI0021618 | None | chrG2 | 146951 | 147054 | + | Low |
| ppe-MIR828 | MI0021619 | None | chrG2 | 29568537 | 29568661 | - | High |
| ppe-MIR482c | MI0021620 | None | chrG3 | 16316472 | 16316592 | + | High |
| ppe-MIR6265 | MI0021621 | None | chrG3 | 19142223 | 19142324 | + | Medium |
| ppe-MIR171h | MI0021622 | None | chrG3 | 21868080 | 21868206 | + | High |
| ppe-MIR171a | MI0021623 | None | chrG3 | 21899734 | 21899848 | + | High |
| ppe-MIR477a | MI0021624 | None | chrG3 | 15484911 | 15485032 | - | Medium |
| ppe-MIR477b | MI0021625 | None | chrG3 | 15489969 | 15490090 | - | Medium |
| ppe-MIR171e | MI0021626 | None | chrG3 | 21899742 | 21899838 | - | High |
| ppe-MIR6266a | MI0021627 | None | chrG4 | 6953575 | 6953851 | + | Medium |
| ppe-MIR6267a | MI0021628 | None | chrG4 | 9731649 | 9731752 | + | - |
| ppe-MIR169e | MI0021629 | None | chrG1 | 5644236 | 5644371 | + | High |
| ppe-MIR6269 | MI0021630 | None | chrG4 | 18225135 | 18225229 | + | Medium |
| ppe-MIR398a | MI0021631 | None | chrG4 | 20111541 | 20111659 | + | High |
| ppe-MIR6270 | MI0021632 | None | chrG4 | 25420161 | 25420537 | + | High |
| ppe-MIR6271 | MI0021633 | None | chrG4 | 8927455 | 8927577 | - | Low |
| ppe-MIR6267b | MI0021634 | None | chrG4 | 13697254 | 13697366 | - | - |
| ppe-MIR6272 | MI0021635 | None | chrG4 | 17378189 | 17378293 | - | - |
| ppe-MIR6273 | MI0021636 | None | chrG5 | 3421262 | 3421384 | + | - |
| ppe-MIR319a | MI0021637 | None | chrG5 | 17215362 | 17215601 | + | - |
| ppe-MIR6274a | MI0021638 | None | chrG5 | 3414958 | 3415086 | - | - |
| ppe-MIR6275 | MI0021639 | None | chrG5 | 10003687 | 10003793 | - | - |
| ppe-MIR319b | MI0021640 | None | chrG5 | 11601224 | 11601324 | - | - |
| ppe-MIR171g | MI0021641 | None | chrG5 | 13602614 | 13602708 | - | - |
| ppe-MIR6276 | MI0021642 | None | chrG6 | 8107914 | 8108022 | - | - |
| ppe-MIR6277 | MI0021643 | None | chrG6 | 30077200 | 30077295 | - | Medium |
| ppe-MIR6278 | MI0021644 | None | chrG7 | 7788546 | 7788643 | + | - |
| ppe-MIR6279 | MI0021645 | None | chrG7 | 15778379 | 15778531 | + | - |
| ppe-MIR171b | MI0021646 | None | chrG7 | 21049795 | 21049903 | + | High |
| ppe-MIR6280 | MI0021647 | None | chrG7 | 9285605 | 9285769 | - | - |
| ppe-MIR6281 | MI0021648 | None | chrG8 | 277601 | 277760 | + | Medium |
| ppe-MIR6282 | MI0021649 | None | chrG8 | 11934930 | 11935271 | + | - |
| ppe-MIR6283 | MI0021650 | None | chrG8 | 20371635 | 20371762 | + | Low |
| ppe-MIR6284 | MI0021651 | None | chrG8 | 21692327 | 21692423 | + | Low |
| ppe-MIR482d | MI0021652 | None | chrG8 | 11352888 | 11353031 | - | - |
| ppe-MIR6285 | MI0021653 | None | chrG8 | 17429089 | 17429169 | - | High |
| ppe-MIR6286 | MI0021654 | None | chrG3 | 12956260 | 12956357 | - | Low |
| ppe-MIR482e | MI0021655 | None | chrG1 | 30620690 | 30620817 | + | High |
| ppe-MIR6287 | MI0021656 | None | chrG1 | 18210159 | 18210235 | - | - |
| ppe-MIR6288a | MI0021657 | None | chrG2 | 22319732 | 22319831 | + | - |
| ppe-MIR6289 | MI0021659 | None | chrG3 | 4938144 | 4938248 | - | - |
| ppe-MIR171c | MI0021660 | None | chrG3 | 26848360 | 26848458 | - | - |
| ppe-MIR6266b | MI0021661 | None | chrG4 | 8232230 | 8232463 | + | - |
| ppe-MIR6290 | MI0021662 | None | chrG4 | 24414214 | 24414309 | + | - |
| ppe-MIR6291a | MI0021663 | None | chrG4 | 8769016 | 8769145 | - | Low |
| ppe-MIR6292 | MI0021664 | None | chrG4 | 11592569 | 11592643 | - | Medium |
| ppe-MIR398b | MI0021665 | None | chrG4 | 19261810 | 19261934 | - | High |
| ppe-MIR6293 | MI0021666 | None | chrG5 | 2922247 | 2922354 | + | Medium |
| ppe-MIR6294 | MI0021667 | None | chrG5 | 18318443 | 18318646 | + | High |
| ppe-MIR6295 | MI0021668 | None | chrG6 | 27549124 | 27549453 | + | Low |
| ppe-MIR6296 | MI0021669 | None | chrG6 | 30127057 | 30127187 | + | - |
| ppe-MIR6291b | MI0021670 | None | chrG7 | 5852748 | 5852898 | + | - |
| ppe-MIR6266c | MI0021671 | None | chrG7 | 12263799 | 12264064 | - | - |
| ppe-MIR6297a | MI0021672 | None | chrG8 | 6394030 | 6394174 | + | Low |
| ppe-MIR6297b | MI0021673 | None | chrG8 | 2802745 | 2802847 | - | Low |