Accession
MI0021625
Description
Prunus persica
ppe-MIR477b precursor miRNA
Sequence
cuaaggagaagguuccaacuUCCCUCAAGGGCUCCCAAUAUUccauguuaauacuccgauaucaaaaucaaguaugggaauGUUGGGGGCUCUUUUGGGACGuugaagcccuugcuccuugg
((((((((((((((.((((.((((..((((((((((((((((((......(((((..(((......))).))))).))))))))))))))))))..)))).)))).)).)))).))))))))
((((((((((((((.((((.((((..((((((((((((((((((......(((((..(((......))).))))).))))))))))))))))))..)))).)))).)).)))).))))))))
Structure
- - c u UC auguua cc au
cuaaggag aagg uu caac UCCC AAGGGCUCCCAAUAUUcc auacu gau c
|||||||| |||| || |||| |||| |||||||||||||||||| ||||| |||
gguuccuc uucc ga guuG AGGG UUCUCGGGGGUUGuaagg uauga cua a
g c a C UU -----g -a aa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG3: 15489969-15490090 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppe-MIR477b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppe-miR477b-5p
| Accession | MIMAT0031171 |
| Description | Prunus persica ppe-miR477b-5p mature miRNA |
| Sequence | 21 - UCCCUCAAGGGCUCCCAAUAUU - 42 |
| Evidence |
experimental
Illumina [2] |
Mature ppe-miR477b-3p
| Accession | MIMAT0027288 |
| Description | Prunus persica ppe-miR477b-3p mature miRNA |
| Sequence | 82 - GUUGGGGGCUCUUUUGGGACG - 102 |
| Evidence |
experimental
Illumina [1-2] |
References
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