Accession
MI0021667
Description
Prunus persica
ppe-MIR6294 precursor miRNA
Sequence
74
reads,
54.0
reads per million, 16 experiments
uggcacaacagaUUGUGAUUAGCCUACACCAagaugcaccaauacugcuagacuaaucacugaccauaaucaguaggaauuccggaccaaauugaauugaaggugcauaauugggugcaaugcuuuaauugacauugcucuagcaaucccacagagacagcauuggugcaucgUGGUGUAGGCUAAUCACAAUCuguuuuauac
......(((((((((((((((((((((((((.(((((((((((.(((((.........(((((......))))).((.((((.(((.(((..(.((((((((.(((((......)))))...)))))))).)..))).))).).))).))....)).))).))))))))))).)))))))))))))))))))))))))......
......(((((((((((((((((((((((((.(((((((((((.(((((.........(((((......))))).((.((((.(((.(((..(.((((((((.(((((......)))))...)))))))).)..))).))).).))).))....)).))).))))))))))).)))))))))))))))))))))))))......
Structure
uggcac a a - agacuaaucacugaccauaaucagua a - c c au g --g aa
aacagaUUGUGAUUAGCCUACACCA gaugcaccaau cug cu gg auu c gga caa u aauugaag ugcau u
||||||||||||||||||||||||| ||||||||||| ||| || || ||| | ||| ||| | |||||||| |||||
uuguCUAACACUAAUCGGAUGUGGU cuacgugguua gac ga cc uaa g ucu guu a uuaauuuc acgug u
cauauu g c a ----------------------gaca c c a c ac g gua gg
Annotation confidence
High
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG5: 18318443-18318646 [+]
Database links
Mature ppe-miR6294-5p
| Accession | MIMAT0058491 |
| Description | Prunus persica ppe-miR6294-5p mature miRNA |
| Sequence | 13 - UUGUGAUUAGCCUACACCA - 31 |
| Evidence |
experimental
unknown |
Mature ppe-miR6294-3p
| Accession | MIMAT0027330 |
| Description | Prunus persica ppe-miR6294-3p mature miRNA |
| Sequence | 174 - UGGUGUAGGCUAAUCACAAUC - 194 |
| Evidence |
experimental
Illumina [1] |
References
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