Accession
MI0021636
Description
Prunus persica
ppe-MIR6273 precursor miRNA
Sequence
cugcaaaccaaaaaaaaaaaaaaaaaaucauccagcauuccuuuuacagcuauuuacugauucaguaaguaguaccauaaggAAUGCAGCAUGAUUUUUUUUUugcuuguugauuuguuaaau
..(((((.(((......((((((((((((((.(.(((((((((.....(((((((((((...))))))))))).....))))))))).).)))))))))))))).....))).))))).....
..(((((.(((......((((((((((((((.(.(((((((((.....(((((((((((...))))))))))).....))))))))).).)))))))))))))).....))).))))).....
Structure
---cu c aaaaaa c a uuaca a
gcaaa caa aaaaaaaaaaucau c gcauuccuu gcuauuuacug
||||| ||| |||||||||||||| | ||||||||| ||||||||||| u
uguuu guu uUUUUUUUUUAGUA G CGUAAggaa ugaugaaugac
uaaau a -guucg C A uacca u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG5: 3421262-3421384 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppe-MIR6273
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppe-miR6273
| Accession | MIMAT0027299 |
| Description | Prunus persica ppe-miR6273 mature miRNA |
| Sequence | 83 - AAUGCAGCAUGAUUUUUUUUU - 103 |
| Evidence |
experimental
Illumina [1] |
References
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