Accession
MI0021616
Description
Prunus persica
ppe-MIR394a precursor miRNA
Literature search
3 open access papers mention ppe-MIR394a
(4 sentences)
(4 sentences)
Sequence
59076
reads,
15297.0
reads per million, 20 experiments
ggguuuagcaaagcguuucuuacagaguuuaUUGGCAUUCUGUCCACCUCCucucuuuuucacucccuguguauuagaagauaguacguguggaggugggcauacugccaacugAGCUCUGUUGGCUUCUCUUUGuaaaacccu
((((((.((((((.(...((.((((((((((((((((...((((((((((((((((....(((.....)))....)).)))..........)))))))))))...)))))).)))))))))).))...).)))))).)))))).
((((((.((((((.(...((.((((((((((((((((...((((((((((((((((....(((.....)))....)).)))..........)))))))))))...)))))).)))))))))).))...).)))))).)))))).
Structure
- a c uuu u - UUC ---------- - uuuu u ggguuu gcaaag g cu acagaguuua UUGGCA UGUCCACCUCC ucu cu cac c |||||| |||||| | || |||||||||| |||||| ||||||||||| ||| || ||| c cccaaa uGUUUC C GG UGUCUCGAgu aaccgu acggguggagg aga ga gug c u a U UUC U c cau ugugcaugau a uuau u
Annotation confidence
Low
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Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG1: 33109945-33110088 [-]
Database links
Mature ppe-miR394a-5p
| Accession | MIMAT0031167 |
| Description | Prunus persica ppe-miR394a-5p mature miRNA |
| Sequence | 32 - UUGGCAUUCUGUCCACCUCC - 51 |
| Evidence |
experimental
Illumina [2] |
Mature ppe-miR394a-3p
| Accession | MIMAT0058465 |
| Description | Prunus persica ppe-miR394a-3p mature miRNA |
| Sequence | 115 - AGCUCUGUUGGCUUCUCUUUG - 135 |
| Evidence |
experimental
unknown |
References
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