Accession
MI0021661
Description
Prunus persica
ppe-MIR6266b precursor miRNA
Sequence
690
reads,
49.0
reads per million, 18 experiments
cuuuuucuauuaaaugcAGGGGCAAAAUGAUAUUUuuauauuaaaauaaaaaaaaugaauaaaaaauuauaucuuuaaaauaacaauaaaagaaaaucaaauaaauaaauaaauaaauaaaaaaguuuuggggaguaaaaauugggauagagaguuuaauuuuaauuuuuuauucauauuuuuauaaauuuugacacaaaaauaccauUUUGCCCUUGCAUUUAACAGAaaagu
.(((((((.((((((((((((((((((((.(((((((...(((((((.(((((.(((((((((((((((..((((((...(..((((.........(((((.........................))))).........))))..))))))).........))))))))))))))).)))))....)))))))...))))))).)))))))))))))))))))).))))))).
.(((((((.((((((((((((((((((((.(((((((...(((((((.(((((.(((((((((((((((..((((((...(..((((.........(((((.........................))))).........))))..))))))).........))))))))))))))).)))))....)))))))...))))))).)))))))))))))))))))).))))))).
Structure
c a A aua ---a a -------ua aaa aa aaaagaaaa uaaauaaauaa uuuuucu uuaaaugcAGGGGCAAAAUG UAUUUuu uuaaaau aaaaa augaauaaaaaauua ucuuua u caau ucaaa a ||||||| |||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||| |||||| | |||| ||||| u gaaaAGA AAUUUACGUUCCCGUUUuac auaaaaa aguuuua uuuuu uacuuauuuuuuaau agagau a guua gguuu a u C c cac aaua a uuuaauuug --- gg aaaaugagg ugaaaaaauaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG4: 8232230-8232463 [+]
Database links
Mature ppe-miR6266b-5p
| Accession | MIMAT0027324 |
| Description | Prunus persica ppe-miR6266b-5p mature miRNA |
| Sequence | 18 - AGGGGCAAAAUGAUAUUU - 35 |
| Evidence |
experimental
Illumina [1] |
Mature ppe-miR6266b-3p
| Accession | MIMAT0058486 |
| Description | Prunus persica ppe-miR6266b-3p mature miRNA |
| Sequence | 209 - UUUGCCCUUGCAUUUAACAGA - 229 |
| Evidence |
experimental
unknown |
References
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