Accession
MI0021672
Description
Prunus persica
ppe-MIR6297a precursor miRNA
Sequence
1981
reads,
352.0
reads per million, 20 experiments
cgcgcgaAGUGACUUUGCGCGACGAAUUAUUuuucaucgcgcaaaauguggucgcgcaagacuuugagugacgaguuucaaguuucgucgcgcaaaaugacuuugagcgacgAAUAAUUUUUCGUCGCGCAAAAUuuggucgcgu
.((((((...((.(((((((((((((..(((.(((.((((.((((.((((....))))....((((.((((((((........)))))))).)))).....)))).)))).))).)))..))))))))))))).))...))))))
.((((((...((.(((((((((((((..(((.(((.((((.((((.((((....))))....((((.((((((((........)))))))).)))).....)))).)))).))).)))..))))))))))))).))...))))))
Structure
c AGU C UU u a g auguggucgcgcaagac a uuu gcgcga GA UUUGCGCGACGAA AUU uuc ucgc caaa uuug gugacgag c |||||| || ||||||||||||| ||| ||| |||| |||| |||| |||||||| ugcgcu uU AAACGCGCUGCUU UAA AAg agcg guuu aaac cgcugcuu a - ggu A UU U c a ------------cagua g uga
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG8: 6394030-6394174 [+]
Database links
Mature ppe-miR6297a-5p
| Accession | MIMAT0058495 |
| Description | Prunus persica ppe-miR6297a-5p mature miRNA |
| Sequence | 8 - AGUGACUUUGCGCGACGAAUUAUU - 31 |
| Evidence |
experimental
unknown |
Mature ppe-miR6297a-3p
| Accession | MIMAT0027335 |
| Description | Prunus persica ppe-miR6297a-3p mature miRNA |
| Sequence | 113 - AAUAAUUUUUCGUCGCGCAAAAU - 135 |
| Evidence |
experimental
Illumina [1] |
References
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