Accession
MI0021652
Description
Prunus persica
ppe-MIR482d precursor miRNA
Literature search
3 open access papers mention ppe-MIR482d
(7 sentences)
(7 sentences)
Sequence
149
reads,
11.0
reads per million, 13 experiments
aggcCUCCCAGAGGCCAAUGGAGAUGgguggcugggaaggauccucauaauuucucuacauuuuauuaauugaaaacuaaggaggugacaaaauaggggcucCCUCCCAUGCCACGCAUUUCUAUuguuucuggguuucucucc
.((...(((((((((.((((((((((.((((((((((.(((.((((...((((((.((..(((((.....)))))..)).)))))).........)))).))).))))).))))).)))))))))))))))))))...))....
.((...(((((((((.((((((((((.((((((((((.(((.((((...((((((.((..(((((.....)))))..)).)))))).........)))).))).))))).))))).)))))))))))))))))))...))....
Structure
---a cCU C g - a u ------aua c ca u
gg CCCAGAGGC AAUGGAGAUG guggc uggga gga ccuc auuucu ua uuuua u
|| ||||||||| |||||||||| ||||| ||||| ||| |||| |||||| || ||||| a
uc gggucuuug uUAUCUUUAC CACCG ACCCU Ccu gggg uggagg au aaagu a
ccuc uuu - G U C c auaaaacag a ca u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG8: 11352888-11353031 [-]
Database links
Mature ppe-miR482d-5p
| Accession | MIMAT0031174 |
| Description | Prunus persica ppe-miR482d-5p mature miRNA |
| Sequence | 5 - CUCCCAGAGGCCAAUGGAGAUG - 26 |
| Evidence |
experimental
Illumina [2] |
Mature ppe-miR482d-3p
| Accession | MIMAT0027315 |
| Description | Prunus persica ppe-miR482d-3p mature miRNA |
| Sequence | 103 - CCUCCCAUGCCACGCAUUUCUAU - 125 |
| Evidence |
experimental
Illumina [1-2] |
References
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