Accession
MI0021648
Description
Prunus persica
ppe-MIR6281 precursor miRNA
Sequence
4147
reads,
344.0
reads per million, 20 experiments
aaggaggucgaguguUAGAGAUAGAGAGAGUGAGUGagagacuaacagucgauauagagugauggcgguggugugaggcguagaacuaagagagugauggcgguggugcgagacugucagucucucaUUCACUCUCUCUGUCUCUGAUgcucaaucucuu
.(((((((.((((((((((((((((((((((((((((((((((.((((((..(((...((.((.((..((((............)))).....)).)).))....)))...)))))).)))))))))))))))))))))))))))))))))).)))))))
.(((((((.((((((((((((((((((((((((((((((((((.((((((..(((...((.((.((..((((............)))).....)).)).))....)))...)))))).)))))))))))))))))))))))))))))))))).)))))))
Structure
a c a -ga -aga g g ---gg gugag aggaggu gaguguUAGAGAUAGAGAGAGUGAGUGagagacu acaguc uau gu au gc uggu g ||||||| |||||||||||||||||||||||||||||||||| |||||| ||| || || || |||| uucucua cucgUAGUCUCUGUCUCUCUCACUUacucucuga ugucag gug cg ua ug auca c - a c agc gugg g g agaga agaug
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG8: 277601-277760 [+]
Database links
Mature ppe-miR6281-5p
| Accession | MIMAT0027311 |
| Description | Prunus persica ppe-miR6281-5p mature miRNA |
| Sequence | 16 - UAGAGAUAGAGAGAGUGAGUG - 36 |
| Evidence |
experimental
Illumina [1] |
Mature ppe-miR6281-3p
| Accession | MIMAT0058480 |
| Description | Prunus persica ppe-miR6281-3p mature miRNA |
| Sequence | 128 - UUCACUCUCUCUGUCUCUGAU - 148 |
| Evidence |
experimental
unknown |
References
|
