Stem-loop ppe-MIR6267b

Accession

MI0021634

Description

Prunus persica ppe-MIR6267b precursor miRNA

Sequence

ggaaugcuagagagaccacauuauuguaccaccucucuaauagagguagggcugcucaccaauacaaguagguccaaacuccAUUAGAGAGGCGGUAAACAAUauaguacaau
.................((..(((((((((.((((((((((.(((...((((((((..........)))).))))...))).)))))))))).)))..))))))..)).....

Structure

ggaaugcuagagagacc  au      --   a          a   gua    -    cacc 
                 ac  uauugu  acc ccucucuaau gag   gggc ugcu    a
                 ||  ||||||  ||| |||||||||| |||   |||| ||||     
                 ug  aUAACA  UGG GGAGAGAUUA cuc   ccug auga    a
------------uaaca  au      AA   C          c   aaa    g    acau 

Annotation confidence Not enough data

Comments

Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.

Genome context

chrG4: 13697254-13697366 [-]

Mature ppe-miR6267b

• Accession: MIMAT0027297
• Description: Prunus persica ppe-miR6267b mature miRNA
• Sequence: 83 - AUUAGAGAGGCGGUAAACAAU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22863067
   High-throughput sequencing of small RNAs and analysis of differentially expressed microRNAs associated with pistil development in Japanese apricot
   Gao Z, Shi T, Luo X, Zhang Z, Zhuang W, Wang L
   BMC Genomics (2012) 13:371