Accession
MI0021668
Description
Prunus persica
ppe-MIR6295 precursor miRNA
Sequence
13681
reads,
375.0
reads per million, 20 experiments
ucaaaaaUGCUGAAUCAUCAUCUGUCCucaagcucuguuauucaauaaguaacuuguccucccccacagcuuacacauucuuuuucuuuuuacuguuggucauuuuuaucucauuuaucuuuaguucacauuugacgaggugagauuucuaaauugcaaaagugucaacucaugagauuuuuaccaagggaacgcaaguugagguuagcagugaugaagaggguuuaaugguacuuuguuugcugcaacuauaguggaaacugugggggaggacaaguuccuuauugaauaccagagcuuGAGGACAGAAGAUGAUUCAGCauuucugag
(((.(((((((((((((((.(((((((((((((((((.(((((((((((.(((((((((((((((((((.(..(((................((.(((((.......(((((((........(((((((.((((.(((....((....))...))))))).)))..)))).)))))))....))))).))(((....)))..((((.(((((...(((.(((((........))))).))))))))))))...)))..).))))))))))))))))))).))))))))))).))))))))))))))))).))))))))))))))).))).
(((.(((((((((((((((.(((((((((((((((((.(((((((((((.(((((((((((((((((((.(..(((................((.(((((.......(((((((........(((((((.((((.(((....((....))...))))))).)))..)))).)))))))....))))).))(((....)))..((((.(((((...(((.(((((........))))).))))))))))))...)))..).))))))))))))))))))).))))))))))).))))))))))))))))).))))))))))))))).))).
Structure
- a A u u c ua -----------------------------------------------auucuuuuucuuuuua g cauuuuu uuaucuuu -- a a ggug a uca aaaUGCUGAAUCAUC UCUGUCCucaagcucug uauucaauaag aacuuguccucccccacag u cac cu uuggu aucucau aguu cac uuug cga ag u ||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||| || ||||| ||||||| |||| ||| |||| ||| || agu uuuaCGACUUAGUAG AGACAGGAGuucgagac auaaguuauuc uugaacaggaggggguguc a gug gg aacca uagagua ucaa gug aaac guu uc u g c A c c a ag auaucaacgucguuuguuucaugguaauuugggagaaguagugacgauuggaguugaacgcaa g ---uuuu -------c cu a - -aaa u
Annotation confidence
Low
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Comments
Gao et al. identified small RNAs by sequencing in Prunus mume [1]. The reads were mapped to the Prunus persica genome. This entry represents the Prunus persica sequence, but the evidence for mature RNA expression is from Prunus mume.
Genome context
chrG6: 27549124-27549453 [+]
Database links
Mature ppe-miR6295-5p
| Accession | MIMAT0058492 |
| Description | Prunus persica ppe-miR6295-5p mature miRNA |
| Sequence | 8 - UGCUGAAUCAUCAUCUGUCC - 27 |
| Evidence |
experimental
unknown |
Mature ppe-miR6295-3p
| Accession | MIMAT0027331 |
| Description | Prunus persica ppe-miR6295-3p mature miRNA |
| Sequence | 301 - GAGGACAGAAGAUGAUUCAGC - 321 |
| Evidence |
experimental
Illumina [1] |
References
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