Stem-loop gma-MIR390f

Accession

MI0021702

Description

Glycine max gma-MIR390f precursor miRNA

Literature search

19 open access papers mention gma-MIR390f
(71 sentences)

Sequence

1531712 reads, 2656.0 reads per million, 172 experiments

agaaucuguaAAGCUCAGGAGGGAUAGCGCCacaacacucaugauuuuauaucauaauauauUUGGCGCUAUCUAUCCUGAGUuucacggguucuucuuacgg
(((((((((.((((((((((.(((((((((((........(((((.....)))))........))))))))))).)))))))))).)))))))))........

Structure

--------         a          G           caacacuc     u 
        agaaucugu AAGCUCAGGA GGAUAGCGCCa        augau u
        ||||||||| |||||||||| |||||||||||        ||||| u
        ucuugggca uuUGAGUCCU UCUAUCGCGGU        uacua a
ggcauucu         c          A           Uuauauaa     u 

Annotation confidence Medium

Genome context

chr11: 15535991-15536093 [-]

Mature gma-miR390f-5p

• Accession: MIMAT0024908
• Description: Glycine max gma-miR390f-5p mature miRNA
• Sequence: 11 - AAGCUCAGGAGGGAUAGCGCC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR390f-3p

• Accession: MIMAT0054389
• Description: Glycine max gma-miR390f-3p mature miRNA
• Sequence: 63 - UUGGCGCUAUCUAUCCUGAGU - 83
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169