Stem-loop gma-MIR390g

Accession

MI0021703

Description

Glycine max gma-MIR390g precursor miRNA

Literature search

19 open access papers mention gma-MIR390g
(71 sentences)

Sequence

1532827 reads, 2676.0 reads per million, 171 experiments

aucuguaAAGCUCAGGAGGGAUAGCGCCacgacacucaugauuuucacaucauaguguauUUGGCGCUAUCUAUCCUGAGUuucacggguuuuucuuacugu
((((((.((((((((((.(((((((((((..(((((.(((((......))))))))))...))))))))))).)))))))))).))))))............

Structure

------------      a          G           -cg     c     uu 
            aucugu AAGCUCAGGA GGAUAGCGCCa   acacu augau  u
            |||||| |||||||||| |||||||||||   ||||| |||||   
            ugggca uuUGAGUCCU UCUAUCGCGGU   uguga uacua  c
ugucauucuuuu      c          A           Uua     -     ca 

Annotation confidence Medium

Genome context

chr18: 5065776-5065877 [-]

Mature gma-miR390g-5p

• Accession: MIMAT0024909
• Description: Glycine max gma-miR390g-5p mature miRNA
• Sequence: 8 - AAGCUCAGGAGGGAUAGCGCC - 28
• Evidence: experimental ; Illumina [1]

Mature gma-miR390g-3p

• Accession: MIMAT0054390
• Description: Glycine max gma-miR390g-3p mature miRNA
• Sequence: 61 - UUGGCGCUAUCUAUCCUGAGU - 81
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169