Stem-loop gma-MIR1515b

Accession

MI0021720

Description

Glycine max gma-MIR1515b precursor miRNA

Literature search

10 open access papers mention gma-MIR1515b
(21 sentences)

Sequence

142170 reads, 464.0 reads per million, 176 experiments

uguucaUCAUUUUGCGUGCAAUGAUCUGaaccauuuucauucccuguaccguuguuucguucuggcauaaccaaauuaggucauuguuuuuugguuuguggaaaauguuUCUGAUCAUUCACGCAAAAUGaugucaauuuu
((..((((((((((((((.(((((((.(((.(((((((....((.....((......))....))((((((((((..(.(....).)..))))).)))))))))))).))).))))))))))))))))))))).)).....

Structure

-----  uu              C       U   c       auucccuguaccguuguuucguucugg     -     uu g u 
     ug  caUCAUUUUGCGUG AAUGAUC Gaa cauuuuc                           cauaa ccaaa  a g c
     ||  |||||||||||||| ||||||| ||| |||||||                           ||||| |||||  | |  
     ac  guaGUAAAACGCAC UUACUAG CUu guaaaag                           guguu gguuu  u u a
uuuua  -u              -       U   u       ---------------------------     u     uu g u 

Annotation confidence Medium

Genome context

chr11: 6656792-6656932 [-]

Mature gma-miR1515b-5p

• Accession: MIMAT0024926
• Description: Glycine max gma-miR1515b-5p mature miRNA
• Sequence: 7 - UCAUUUUGCGUGCAAUGAUCUG - 28
• Evidence: experimental ; Illumina [1]

Mature gma-miR1515b-3p

• Accession: MIMAT0054406
• Description: Glycine max gma-miR1515b-3p mature miRNA
• Sequence: 110 - UCUGAUCAUUCACGCAAAAUG - 130
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169