Stem-loop gma-MIR1516d

Accession

MI0021721

Description

Glycine max gma-MIR1516d precursor miRNA

Literature search

1 open access papers mention gma-MIR1516d
(1 sentences)

Sequence

598 reads, 12.0 reads per million, 123 experiments

guuuggauacaagauagAAGUGCUUUUGAGAACUUcucuaucaaaaaaaguucuauauuucuaauagaaAAGAUCUCAAAAGUACUUGUGgcuuguauccaaacaau
(((((((((((((.((.((((((((((((((.(((.(((((......................))))).))).)))))))))))))).)).)))))))))))))...

Structure

---             a  g              A   c     caaaaaaagu 
   guuuggauacaag ua AAGUGCUUUUGAGA CUU ucuau          u
   ||||||||||||| || |||||||||||||| ||| |||||           
   caaaccuauguuc GU UUCAUGAAAACUCU GAA agaua          c
uaa             g  G              A   a     aucuuuauau 

Annotation confidence Medium

Genome context

chr8: 46223096-46223202 [-]

Mature gma-miR1516d-5p

• Accession: MIMAT0054407
• Description: Glycine max gma-miR1516d-5p mature miRNA
• Sequence: 18 - AAGUGCUUUUGAGAACUU - 35
• Evidence: experimental ; unknown

Mature gma-miR1516d-3p

• Accession: MIMAT0024927
• Description: Glycine max gma-miR1516d-3p mature miRNA
• Sequence: 70 - AAGAUCUCAAAAGUACUUGUG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169