Stem-loop gma-MIR6300

Accession

MI0021724

Description

Glycine max gma-MIR6300 precursor miRNA

Literature search

0 open access papers mention gma-MIR6300
(0 sentences)

Sequence

agguaaaaauacuuaccacuauauuacaacaacuuguuugugaaauucaaugguaauuuuaaauaauaaauguuuuaauauuaccgauagcauuugauuauauuuuuguuuuaaaguuacauuugauuauaucgcuaucggcuauaauguaagucauauucauccaauaucaugcaacuuuuuuguauagauauauuaauauuacucgauaaucaucaaGUCGUUGUAGUAUAGUGGuaaguauucccgcc
.(((...(((((((((((((((((((((((.(((((...((((...((...((((((.((((.......(((.((((.(((((((((((((((.((((((......(((.........)))..)))))).)).))))))))...))))))))).))).........(((((((((((.....)))))).))))).)))).)))))).))...))))))))).)))))))))))))))))))))))...)))

Structure

a   aaa                       a     uuu    aau  aau      u    -------------------------------auaauaa   u    a     ---        -  u      uauuuu   uuu 
 ggu   aauacuuaccacuauauuacaac acuug   guga   uc   gguaau uuaa                                      aug uuua uauua   ccgauagc au ugauua      ugu   a
 |||   ||||||||||||||||||||||| |||||   ||||   ||   |||||| ||||                                      ||| |||| |||||   |||||||| || ||||||      |||   a
 ccg   uuaugaauGGUGAUAUGAUGUUG UGaac   uacu   ag   ucauua aauu                                      uac gaau guaau   ggcuaucg ua auuagu      aca   a
-   ccc                       C     ---    aau  --c      u    auauagauauguuuuuucaacguacuauaaccuacuua   u    -     auc        c  u      ----uu   uug 

Annotation confidence Not enough data

Genome context

chr8: 3181460-3181710 [-]

Mature gma-miR6300

• Accession: MIMAT0024929
• Description: Glycine max gma-miR6300 mature miRNA
• Sequence: 220 - GUCGUUGUAGUAUAGUGG - 237
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169