Stem-loop sma-mir-8

Accession

MI0021831

Description

Schistosoma mansoni sma-mir-8 precursor miRNA

Sequence

augagugugaCAUCUUACUAACAGUAUUUGAcaaacuacuuucUAAUACUGUUAGGUAAAGAUGCCagcucaauuc
.(((((.((.((((((.(((((((((((.((..........)).)))))))))))...)))))).)))))))....

Structure

---a     g  a      --A           U  caaa 
    ugagu ug CAUCUU   CUAACAGUAUU GA    c
    ||||| || ||||||   ||||||||||| ||     
    acucg aC GUAGAA   GAUUGUCAUAA cu    u
cuua     -  C      AUG           U  uuca 

Annotation confidence Not enough data

Genome context

Chr_1: 10044867-10044942 [-]

Mature sma-miR-8-5p

• Accession: MIMAT0025045
• Description: Schistosoma mansoni sma-miR-8-5p mature miRNA
• Sequence: 11 - CAUCUUACUAACAGUAUUUGA - 31
• Evidence: experimental ; Illumina [2], SOLiD [2]

Mature sma-miR-8-3p

• Accession: MIMAT0025046
• Description: Schistosoma mansoni sma-miR-8-3p mature miRNA
• Sequence: 44 - UAAUACUGUUAGGUAAAGAUGCC - 66
• Evidence: experimental ; Illumina [2], SOLiD [2]

References

1. PubMed ID: 21640815
   Genome-wide identification of novel microRNAs and their target genes in the human parasite Schistosoma mansoni
   "de Souza Gomes M, Muniyappa MK, Carvalho SG, Guerra-Sa R, Spillane C"
   "Genomics (2011) 98:96-111


2. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402