Accession
MI0021967
Description
Populus trichocarpa
ptc-MIR6461 precursor miRNA
Sequence
122
reads,
2.0
reads per million, 9 experiments
aguuauucuuagagaguuuuuuagacucaagUUCUGAUCCAUGUACUGGCUaguugguuuuccuuuugaaaacUAGCUAGCAAGUUCAUGGAUCggaacucucagucugaaaaaacugaugagcu
.......((((...(((((((((((((..((((((((((((((.(((.((((((((((((((.....)))))))))))))).))).))))))))))))))...)))))).)))))))..))))..
.......((((...(((((((((((((..((((((((((((((.(((.((((((((((((((.....)))))))))))))).))).))))))))))))))...)))))).)))))))..))))..
Structure
aguuauu gag - -ca U G c
cuua aguuuuu uagacu agUUCUGAUCCAUG ACU GCUaguugguuuuc u
|||| ||||||| |||||| |||||||||||||| ||| |||||||||||||| u
gagu ucaaaaa gucuga ucaaggCUAGGUAC UGA CGAUCGAUcaaaag u
-----uc -ag a cuc U A u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
CM000339.2: 16752332-16752456 [+]
Database links
Mature ptc-miR6461-5p
| Accession | MIMAT0055667 |
| Description | Populus trichocarpa ptc-miR6461-5p mature miRNA |
| Sequence | 32 - UUCUGAUCCAUGUACUGGCU - 51 |
| Evidence |
experimental
unknown |
Mature ptc-miR6461-3p
| Accession | MIMAT0025187 |
| Description | Populus trichocarpa ptc-miR6461-3p mature miRNA |
| Sequence | 74 - UAGCUAGCAAGUUCAUGGAUC - 94 |
| Evidence |
experimental
miRNAseq [1] |
References
|
