Stem-loop ptc-MIR6440d

Accession

MI0022000

Description

Populus trichocarpa ptc-MIR6440d precursor miRNA

Sequence

guuaaaacucgaaaucaaucaaacucggucaaacucguaaaaucgaucugauuuuaccgauuuuaacugaguuugaccGAGUUUGAUCGAUUUCGAGUUuuaac
((((((((((((((((.((((((((((((((((((((((((((((............))))))))..)))))))))))))))))))).))))))))))))))))

Structure

                a                    --        aucug 
guuaaaacucgaaauc aucaaacucggucaaacucg  uaaaaucg     a
|||||||||||||||| ||||||||||||||||||||  ||||||||      
caauuUUGAGCUUUAG UAGUUUGAGccaguuugagu  auuuuagc     u
                C                    ca        cauuu 

Annotation confidence Not enough data

Genome context

CM000347.2: 1847222-1847325 [+]

Mature ptc-miR6440d

• Accession: MIMAT0025226
• Description: Populus trichocarpa ptc-miR6440d mature miRNA
• Sequence: 79 - GAGUUUGAUCGAUUUCGAGUU - 99
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22442676
   Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
   Puzey JR, Karger A, Axtell M, Kramer EM
   PLoS One (2012) 7:e33034