Accession
MI0022001
Description
Populus trichocarpa
ptc-MIR6427 precursor miRNA
Sequence
ugcacgcucUCGUAAUGCUUCAUUCUCACAAcggcaaaguguuauugcaucauccuaaugauuaucaucagccgucGUGGGAAUGAACAUUAUGAGAcugugua
((((((.((((((((((.(((((((((((.(((((...(((.((....(((((....))))))).)))..))))).))))))))))))))))))))).))))))
((((((.((((((((((.(((((((((((.(((((...(((.((....(((((....))))))).)))..))))).))))))))))))))))))))).))))))
Structure
c C A aaa u uugc c
ugcacg ucUCGUAAUG UUCAUUCUCAC Acggc gug ua aucau c
|||||| |||||||||| ||||||||||| ||||| ||| || |||||
augugu AGAGUAUUAC AAGUAAGGGUG ugccg uac au uagua u
c - c -ac u ---- a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000337.2: 22901410-22901513 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptc-MIR6427
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptc-miR6427-5p
| Accession | MIMAT0025227 |
| Description | Populus trichocarpa ptc-miR6427-5p mature miRNA |
| Sequence | 10 - UCGUAAUGCUUCAUUCUCACAA - 31 |
| Evidence |
experimental
miRNAseq [1] |
Mature ptc-miR6427-3p
| Accession | MIMAT0025228 |
| Description | Populus trichocarpa ptc-miR6427-3p mature miRNA |
| Sequence | 77 - GUGGGAAUGAACAUUAUGAGA - 97 |
| Evidence |
experimental
miRNAseq [1] |
References
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