Stem-loop ptc-MIR6438a

Accession

MI0022013

Description

Populus trichocarpa ptc-MIR6438a precursor miRNA

Sequence

gagaguuguuugaucuguccugaaacaccaaucacgaaucuugcaagaauugagguaUUGUACACAGAAUAGGUGAAAUagcuuuc
(((((((((((.((((((.(((..(((...(((.(((.(((....))).))).)))..)))...))).)))))).)))))))))))

Structure

           g      c   -aa   cca   a   a   u 
gagaguuguuu aucugu cug   aca   auc cga ucu g
||||||||||| |||||| |||   |||   ||| ||| |||  
cuuucgaUAAA UGGAUA GAC   UGU   ugg guu aga c
           G      A   ACA   -Ua   a   a   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ptc-miR6438a

• Accession: MIMAT0025241
• Description: Populus trichocarpa ptc-miR6438a mature miRNA
• Sequence: 58 - UUGUACACAGAAUAGGUGAAAU - 79
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22442676
   Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
   Puzey JR, Karger A, Axtell M, Kramer EM
   PLoS One (2012) 7:e33034