Accession
MI0022030
Description
Populus trichocarpa
ptc-MIR6439b precursor miRNA
Sequence
aaugcugaguaagaagccaaauaaagaAGCAGAAGCCAUCACUAGCGCcgcccuaauuaaaugcucaacccgucauuuugaucgcaacgaguuuucaucugcauaugggaagauuuucauggagaagaaugcuguagcauucaguuaagucugauugcaaaccucgugauguauugagcauuuacuuaauaugcugauggugacuucugccucuugauuuggugccugaaucaacauu
((((.(((...((..(((((((.((((.(((((((.(((((.(((((......(((.(((((((((((..((((((..........((.(((.(((.(((.((..(((((....))))))).))).))).))))).(((.((((......)))).))).......))))))..))))))))))).)))...))))).))))).))))))).)))).)))))))..))...))).))))
((((.(((...((..(((((((.((((.(((((((.(((((.(((((......(((.(((((((((((..((((((..........((.(((.(((.(((.((..(((((....))))))).))).))).))))).(((.((((......)))).))).......))))))..))))))))))).)))...))))).))))).))))))).)))).)))))))..))...))).))))
Structure
c gua aa a A C C Ccgccc u cc --------------------uuugaucgca g u a g ua a
aaug uga ag gccaaau aaga GCAGAAG CAUCA UAGCG uaa uaaaugcucaa cgucau ac agu uuc ucu ca uggga g
|||| ||| || ||||||| |||| ||||||| ||||| ||||| ||| ||||||||||| |||||| || ||| ||| ||| || |||||
uuac acu uc ugguuua uucu cgucuuc guggu gucgu auu auuuacgaguu guagug ug ucg aag aga gu acuuu a
a aag cg g c a a ---aua c au cuccaaacguuagucugaauugacuuacga - u a g -- u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000352.2: 71120-71357 [-]
Database links
Mature ptc-miR6439b
| Accession | MIMAT0025258 |
| Description | Populus trichocarpa ptc-miR6439b mature miRNA |
| Sequence | 28 - AGCAGAAGCCAUCACUAGCGC - 48 |
| Evidence |
experimental
miRNAseq [1] |
References
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