Stem-loop ptc-MIR6454

Accession

MI0022036

Description

Populus trichocarpa ptc-MIR6454 precursor miRNA

Sequence

uagcuggguaacguggaCUUGUAACCUGAGUAGAGGCAauaaagugauauaacauuggcucgcucagcuuagaaggucggguccaguua
(((((((...((.((..(((.(((.((((((.(((.((((...((......)))))).))))))))).))).)))..)).)))))))))

Structure

       gua  g  ga   G   C      A   G    aaa  ga 
uagcugg   ac ug  CUU UAA CUGAGU GAG CAau   gu  u
|||||||   || ||  ||| ||| |||||| ||| ||||   ||   
auugacc   ug gc  gaa auu gacucg cuc guua   ca  a
       ---  g  ug   g   c      -   g    ---  au 

Annotation confidence Not enough data

Genome context

Unknown

Mature ptc-miR6454

• Accession: MIMAT0025264
• Description: Populus trichocarpa ptc-miR6454 mature miRNA
• Sequence: 18 - CUUGUAACCUGAGUAGAGGCA - 38
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22442676
   Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
   Puzey JR, Karger A, Axtell M, Kramer EM
   PLoS One (2012) 7:e33034