Stem-loop tgu-mir-196

Accession

MI0022171

Description

Taeniopygia guttata tgu-mir-196 precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

gguuUAGGUAGUUUCAUGUUGUUGgggcuccaccuuucucucuacagcacgaaacugccuuaauuacuucaguug
((((.((((((((((.((((((.((((...........)))).)))))).)))))))))).))))..........

Structure

----------    U          A      U    cucc 
          gguu AGGUAGUUUC UGUUGU Gggg    a
          |||| |||||||||| |||||| ||||    c
          uuaa uccgucaaag acgaca cucu    c
guugacuuca    u          c      u    cuuu 

Annotation confidence Not enough data

Genome context

chr2: 52627136-52627210 [-]

Mature tgu-miR-196

• Accession: MIMAT0025394
• Description: Taeniopygia guttata tgu-miR-196 mature miRNA
• Sequence: 5 - UAGGUAGUUUCAUGUUGUUG - 24
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727