Stem-loop tgu-mir-499

Accession

MI0022173

Description

Taeniopygia guttata tgu-mir-499 precursor miRNA

Literature search

1 open access papers mention tgu-mir-499
(1 sentences)

Sequence

agagagcggcagUUAAGACUUGUAGUGAUGUUUAgauaauuaauuacaugAACAUCACUUUAAGUCUGUGCUacuucu
...(((.((((....(((((((.(((((((((((..(((....)))..))))))))))).))))))).)))).)))..

Structure

aga   c    gUUA       U           ga   u 
   gag ggca    AGACUUG AGUGAUGUUUA  uaa u
   ||| ||||    ||||||| |||||||||||  |||  
   uuc UCGU    UCUGAAU UCACUACAAgu  auu a
-uc   a    ---G       U           ac   a 

Annotation confidence Low

Genome context

chr20: 3206374-3206451 [-]

Mature tgu-miR-499-5p

• Accession: MIMAT0025396
• Description: Taeniopygia guttata tgu-miR-499-5p mature miRNA
• Sequence: 13 - UUAAGACUUGUAGUGAUGUUUA - 34
• Evidence: experimental ; Illumina [2]

Mature tgu-miR-499-3p

• Accession: MIMAT0027340
• Description: Taeniopygia guttata tgu-miR-499-3p mature miRNA
• Sequence: 51 - AACAUCACUUUAAGUCUGUGCU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727