Stem-loop tgu-mir-30e

Accession

MI0022188

Description

Taeniopygia guttata tgu-mir-30e precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

uuuuaguuccUGUAAACAUCCUACACUCAGCUauuauaagugguggggcuggggguuggguguuuacuucaacugacuu
..((((((...((((((((((.((.(((((((..(((.....))).))))))).)).))))))))))...))))))...

Structure

-uu      ccU          U  A       au   a 
   uuaguu   GUAAACAUCC AC CUCAGCU  uau a
   ||||||   |||||||||| || |||||||  ||| g
   agucaa   cauuuguggg ug gggucgg  gug u
uuc      cuu          u  g       -g   g 

Annotation confidence Not enough data

Genome context

chr2: 149534042-149534120 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from tgu-mir-30e

Mature tgu-miR-30e

• Accession: MIMAT0025411
• Description: Taeniopygia guttata tgu-miR-30e mature miRNA
• Sequence: 11 - UGUAAACAUCCUACACUCAGCU - 32
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727