miRBase entry: hsa-mir-6842

Stem-loop hsa-mir-6842


Accession
MI0022688
Symbol
HGNC: MIR6842
Description
Homo sapiens hsa-mir-6842 precursor miRNA


Sequence

378 reads, 11 reads per million, 33 experiments
agcccUGGGGGUGGUCUCUAGCCAAGGcucuggggucucacccUUGGCUGGUCUCUGCUCCGCAG
....((((((((((...((((((((((...(((....))).))))))))))...))))))).)))

Structure
agcc   -       UCU          cuc   g 
    cUG GGGGUGG   CUAGCCAAGG   ugg g
    ||| |||||||   ||||||||||   |||  
    GAC CCUCGUC   GGUCGGUUcc   acu u
----   G       UCU          --c   c 


Annotation confidence High
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Genome context
chr8: 27433370-27433434 [+]

Database links

Mature hsa-miR-6842-5p

Accession MIMAT0027586
Description Homo sapiens hsa-miR-6842-5p mature miRNA
Sequence 6 - UGGGGGUGGUCUCUAGCCAAGG - 27
Evidence experimental
meta-analysis [1]

Mature hsa-miR-6842-3p

Accession MIMAT0027587
Description Homo sapiens hsa-miR-6842-3p mature miRNA
Sequence 44 - UUGGCUGGUCUCUGCUCCGCAG - 65
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645