Stem-loop hsa-mir-6843

Accession

MI0022689

Symbol

HGNC: MIR6843

Description

Homo sapiens hsa-mir-6843 precursor miRNA

Literature search

1 open access papers mention hsa-mir-6843
(1 sentences)

Sequence

1348 reads, 17.0 reads per million, 90 experiments

cccccauuuccucaggaauaaaagugcagcagugccugcuguggggacagcugagggcagugagGCCCUGGGGAGCUGCUGCaggcagcaggugggcgggacgccagcaggcugucuagcuguucccaugAUGGUCUCCUGUUCUCUGCAG
.((((..((((...)))).......(((((((...)))))))))))...((.((((((((.(((((((..((((((.(((..(((((((..((.((((...)))).))..)))))))))).))))))..)..)))))))))))))).))..

Structure

cccccauuuccucaggaauaaaagugcagcagugccugcuguggggaca  u        u      -- UG      U   GC       ag  g    g 
                                                 gc gagggcag gagGCC  C  GGGAGC GCU  aggcagc  gu ggcg  
                                                 || |||||||| ||||||  |  |||||| |||  |||||||  || |||| g
                                                 CG CUCUUGUC CUCUGG  g  cccuug cga  ucugucg  cg ccgc  
-----------------------------------------------GA  U        -      UA ua      u   --       ga  a    a 

Annotation confidence Low

Genome context

chr8: 27610601-27610751 [-]

Mature hsa-miR-6843-5p

• Accession: MIMAT0061398
• Description: Homo sapiens hsa-miR-6843-5p mature miRNA
• Sequence: 65 - GCCCUGGGGAGCUGCUGC - 82
• Evidence: experimental ; meta-analysis [1]

Mature hsa-miR-6843-3p

• Accession: MIMAT0027588
• Description: Homo sapiens hsa-miR-6843-3p mature miRNA
• Sequence: 131 - AUGGUCUCCUGUUCUCUGCAG - 151
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645