Stem-loop hsa-mir-6880

Accession

MI0022727

Symbol

HGNC: MIR6880

Description

Homo sapiens hsa-mir-6880 precursor miRNA

Literature search

2 open access papers mention hsa-mir-6880
(2 sentences)

Sequence

176 reads, 4.0 reads per million, 68 experiments

gaGGGUGGUGGAGGAAGAGGgcagcucccaugacugccugaCCGCCUUCUCUCCUCCCCCAG
..(((.((.((((((((.(((((((......).))))))......)))).)))).)))))..

Structure

ga   U  U    -    -----A      - uc 
  GGG GG GGAG GAAG      GGgcag c  c
  ||| || |||| ||||      |||||| |   
  CCC CC CCUC CUUC      uccguc g  c
GA   -  U    U    CGCCag      a ua 

Annotation confidence Medium

Genome context

chr12: 124337181-124337242 [-]

Mature hsa-miR-6880-5p

• Accession: MIMAT0027660
• Description: Homo sapiens hsa-miR-6880-5p mature miRNA
• Sequence: 3 - GGGUGGUGGAGGAAGAGG - 20
• Evidence: experimental ; meta-analysis [1]

Mature hsa-miR-6880-3p

• Accession: MIMAT0027661
• Description: Homo sapiens hsa-miR-6880-3p mature miRNA
• Sequence: 42 - CCGCCUUCUCUCCUCCCCCAG - 62
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645