miRBase entry: hsa-mir-6885

Stem-loop hsa-mir-6885


Accession
MI0022732
Symbol
HGNC: MIR6885
Description
Homo sapiens hsa-mir-6885 precursor miRNA

Literature search
1 open access papers mention hsa-mir-6885
(1 sentences)

Sequence

131 reads, 17 reads per million, 23 experiments
ccuggAGGGGGGCACUGCGCAAGCAAAGCCagggacccugagaggCUUUGCUUCCUGCUCCCCUAG
.....(((((((((..(.(.(((((((((((((...)))....)))))))))))))))))))))..

Structure
ccugg         CU C C          ----   g 
     AGGGGGGCA  G G AAGCAAAGCC    agg  
     |||||||||  | | ||||||||||    ||| a
     UCCCCUCGU  C C UUCGUUUCgg    ucc  
---GA         -- - -          agag   c 


Annotation confidence Not enough data
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Genome context
chr19: 6389638-6389703 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-6885
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-6885-5p

Accession MIMAT0027670
Description Homo sapiens hsa-miR-6885-5p mature miRNA
Sequence 6 - AGGGGGGCACUGCGCAAGCAAAGCC - 30
Evidence experimental
meta-analysis [1]

Mature hsa-miR-6885-3p

Accession MIMAT0027671
Description Homo sapiens hsa-miR-6885-3p mature miRNA
Sequence 46 - CUUUGCUUCCUGCUCCCCUAG - 66
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645