Stem-loop hsa-mir-6885

Accession

MI0022732

Symbol

HGNC: MIR6885

Description

Homo sapiens hsa-mir-6885 precursor miRNA

Literature search

4 open access papers mention hsa-mir-6885
(4 sentences)

Sequence

395 reads, 3.0 reads per million, 81 experiments

ccugGAGGGGGGCACUGCGCAAGCAAAGCcagggacccugagaggCUUUGCUUCCUGCUCCCCUAG
.....(((((((((..(.(.(((((((((((((...)))....)))))))))))))))))))))..

Structure

ccugG         CU C C          ----   g 
     AGGGGGGCA  G G AAGCAAAGCc    agg  
     |||||||||  | | ||||||||||    ||| a
     UCCCCUCGU  C C UUCGUUUCgg    ucc  
---GA         -- - -          agag   c 

Annotation confidence High

Genome context

chr19: 6389638-6389703 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-6885

Mature hsa-miR-6885-5p

• Accession: MIMAT0027670
• Description: Homo sapiens hsa-miR-6885-5p mature miRNA
• Sequence: 5 - GAGGGGGGCACUGCGCAAGCAAAGC - 29
• Evidence: experimental ; meta-analysis [1]

Mature hsa-miR-6885-3p

• Accession: MIMAT0027671
• Description: Homo sapiens hsa-miR-6885-3p mature miRNA
• Sequence: 46 - CUUUGCUUCCUGCUCCCCUAG - 66
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645