miRBase entry: mmu-mir-6921

Stem-loop mmu-mir-6921


Accession
MI0022768
Symbol
MGI: Mir6921
Description
Mus musculus mmu-mir-6921 precursor miRNA


Sequence

57 reads, 5 reads per million, 33 experiments
cacacUGAGGGGCAUGAGGUAGGAAGCcgggaguggggggacaguaaaucugaaacgggUGACUACUCCUUGCCUCUCAG
....((((((((((.(.(((((..(.(((....(.(((..........))).)..))).)..))))).).))))))))))

Structure
caca          U A     GA G   ggag g   ggac 
    cUGAGGGGCA G GGUAG  A Ccg    u ggg    a
    |||||||||| | |||||  | |||    | |||     
    GACUCUCCGU C UCAUC  U ggc    a ucu    g
----          U C     AG g   --aa g   aaau 


Annotation confidence High
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Genome context
chr11: 60200538-60200617 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6921
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6921-5p

Accession MIMAT0027742
Description Mus musculus mmu-miR-6921-5p mature miRNA
Sequence 6 - UGAGGGGCAUGAGGUAGGAAGC - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6921-3p

Accession MIMAT0027743
Description Mus musculus mmu-miR-6921-3p mature miRNA
Sequence 60 - UGACUACUCCUUGCCUCUCAG - 80
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645