miRBase entry: mmu-mir-6962

Stem-loop mmu-mir-6962


Accession
MI0022809
Symbol
MGI: Mir6962
Description
Mus musculus mmu-mir-6962 precursor miRNA


Sequence

164 reads, 11 reads per million, 47 experiments
cggaaAAGGACCUGGUGGGAGAUCUcacaucacuguugaUAUCUGCCCUUCCCUGUCCUAUag
......(((((..((.(((((((.(((((....)).))).)))).)))..))..)))))....

Structure
cggaaA     CU  -U   -    C   -  u 
      AGGAC  GG  GGG AGAU Uca ca c
      |||||  ||  ||| |||| ||| ||  
      UCCUG  CC  CCC UCUA agu gu a
--gaUA     UC  UU   G    U   u  c 


Annotation confidence Not enough data
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Genome context
chr15: 101193869-101193931 [+]

Database links

Mature mmu-miR-6962-5p

Accession MIMAT0027824
Description Mus musculus mmu-miR-6962-5p mature miRNA
Sequence 6 - AAGGACCUGGUGGGAGAUCU - 25
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6962-3p

Accession MIMAT0027825
Description Mus musculus mmu-miR-6962-3p mature miRNA
Sequence 40 - UAUCUGCCCUUCCCUGUCCUAU - 61
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645