Stem-loop mmu-mir-6990

Accession

MI0022838

Symbol

MGI: Mir6990

Description

Mus musculus mmu-mir-6990 precursor miRNA

Sequence

147 reads, 10 reads per million, 48 experiments

gcuugCCCAGGGUGAGUCAGGGCUCUccugucaucugggcccccuccgggcucugggaggccgccacuggAGCCCUGCCUCUUCCUGGCAG
...((((.((((.(((.((((((((((((.(((...((((((.....))))))))).)))........))))))))).))).)))))))).

Structure

gcu    C    U   U         --------   g   ucu      c 
   ugCC AGGG GAG CAGGGCUCU        ccu uca   gggccc c
   |||| |||| ||| |||||||||        ||| |||   |||||| u
   ACGG UCCU CUC GUCCCGAgg        gga ggu   cucggg c
--G    -    U   C         ucaccgcc   g   ---      c 

Annotation confidence Not enough data

Genome context

chr19: 6914196-6914286 [-]

Mature mmu-miR-6990-5p

• Accession: MIMAT0027882
• Description: Mus musculus mmu-miR-6990-5p mature miRNA
• Sequence: 6 - CCCAGGGUGAGUCAGGGCUCU - 26
• Evidence: experimental ; meta-analysis [1]

Mature mmu-miR-6990-3p

• Accession: MIMAT0027883
• Description: Mus musculus mmu-miR-6990-3p mature miRNA
• Sequence: 71 - AGCCCUGCCUCUUCCUGGCAG - 91
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645