Stem-loop lja-MIR7526g

Accession

MI0024407

Description

Lotus japonicus lja-MIR7526g precursor miRNA

Sequence

1673 reads, 149.0 reads per million, 9 experiments

gcuaucuuaguagcggaaguuaccgcuacuaaaauAGCUGUAACGUCCGCUAUCAAGGUAGCUGUAACUUCCgcuauuaagauagc
(((((((((((((((((((((((.((((((...(((((.(......).)))))...)))))).)))))))))))))))))))))))

Structure

                       c      aaa     U UA 
gcuaucuuaguagcggaaguuac gcuacu   auAGC G  A
||||||||||||||||||||||| ||||||   ||||| |   
cgauagaauuaucgCCUUCAAUG CGAUGG   UAUCG C  C
                       U      AAC     C UG 

Annotation confidence Low

Genome context

Chr5: 21116696-21116781 [+]

Mature lja-miR7526g-5p

• Accession: MIMAT0054594
• Description: Lotus japonicus lja-miR7526g-5p mature miRNA
• Sequence: 36 - AGCUGUAACGUCCGCUAUCAAGGU - 59
• Evidence: experimental ; unknown

Mature lja-miR7526g-3p

• Accession: MIMAT0029348
• Description: Lotus japonicus lja-miR7526g-3p mature miRNA
• Sequence: 52 - AUCAAGGUAGCUGUAACUUCC - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154