Stem-loop mmu-mir-129b

Accession

MI0025019

Symbol

MGI: Mir129b

Description

Mus musculus mmu-mir-129b precursor miRNA

Literature search

51 open access papers mention mmu-mir-129b
(513 sentences)

Sequence

167580 reads, 9 reads per million, 100 experiments

GCUUUUUGGGGUAAGGGCUUCCggcuauugaguuauguacagCAAGCCCAGACCGCAAAAAGAUU
.(((((((.(((..((((((...(((..............)))))))))..))).)))))))...

Structure

--G       G   AA      CCg   auugag 
   CUUUUUG GGU  GGGCUU   gcu      u
   ||||||| |||  ||||||   |||       
   GAAAAAC CCA  CCCGAA   Cga      u
UUA       G   GA      ---   caugua 

Annotation confidence Not enough data

Genome context

chr2: 94241378-94241442 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-129b

Mature mmu-miR-129b-5p

• Accession: MIMAT0029862
• Description: Mus musculus mmu-miR-129b-5p mature miRNA
• Sequence: 1 - GCUUUUUGGGGUAAGGGCUUCC - 22
• Evidence: experimental ; RNAseq [1]

Mature mmu-miR-129b-3p

• Accession: MIMAT0029863
• Description: Mus musculus mmu-miR-129b-3p mature miRNA
• Sequence: 43 - CAAGCCCAGACCGCAAAAAGAUU - 65
• Evidence: experimental ; RNAseq [1]

References

1. PubMed ID: 23325850
   Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
   "Castellano L, Stebbing J"
   "Nucleic Acids Res (2013) 41:3339-3351