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Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues |
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|---|---|
| PubMed ID | 23325850 |
| Authors | "Castellano L, Stebbing J" |
| Journal | "Nucleic Acids Res |
| Volume | 41 |
| Pages | 3339-3351 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| mmu-mir-7212 | MI0023707 | 11 | 15 | 25948313 | 25948373 | + | - |
| mmu-mir-7213 | MI0023708 | 4 | 15 | 79883171 | 79883227 | - | High |
| mmu-mir-7220 | MI0023715 | 4 | 18 | 61086945 | 61087004 | + | High |
| mmu-mir-6546 | MI0024983 | 31 | 1 | 170892160 | 170892221 | - | Medium |
| mmu-mir-7646 | MI0024984 | 7 | X | 134647465 | 134647518 | + | High |
| mmu-mir-7647 | MI0024985 | 41 | 5 | 123660700 | 123660758 | - | High |
| mmu-mir-7648 | MI0024986 | 7 | 15 | 90108563 | 90108615 | + | - |
| mmu-mir-7649 | MI0024987 | 15 | 6 | 128951803 | 128951858 | - | High |
| mmu-mir-7650 | MI0024988 | 3 | 9 | 15223907 | 15223965 | + | - |
| mmu-mir-7651 | MI0024989 | 2 | 11 | 6351630 | 6351693 | + | High |
| mmu-mir-219b | MI0024990 | 9 | 2 | 29735659 | 29735723 | + | Medium |
| mmu-mir-7036b | MI0024991 | 6 | 5 | 34731495 | 34731557 | + | High |
| mmu-mir-7652 | MI0024992 | 7 | 11 | 55392052 | 55392107 | + | Medium |
| mmu-mir-7653 | MI0024993 | 7 | 11 | 78069653 | 78069713 | + | Medium |
| mmu-mir-7654 | MI0024994 | 8 | 8 | 8740093 | 8740162 | - | Medium |
| mmu-mir-7655 | MI0024995 | 7 | 2 | 18062657 | 18062714 | + | High |
| mmu-mir-7656 | MI0024996 | 6 | 9 | 94633882 | 94633943 | + | High |
| mmu-mir-7657 | MI0024997 | 5 | 3 | 122335274 | 122335330 | - | Medium |
| mmu-mir-7658 | MI0024998 | 5 | 4 | 156314516 | 156314572 | - | High |
| mmu-mir-7659 | MI0024999 | 7 | 10 | 78175984 | 78176041 | - | - |
| mmu-mir-7660 | MI0025000 | 5 | 6 | 115752618 | 115752680 | + | - |
| mmu-mir-7661 | MI0025001 | 3 | 6 | 108466704 | 108466764 | + | - |
| mmu-mir-7662 | MI0025002 | 6 | 10 | 62029946 | 62030006 | - | High |
| mmu-mir-7663 | MI0025003 | 4 | 10 | 22605271 | 22605331 | - | - |
| mmu-mir-7664 | MI0025004 | 2 | 2 | 24949823 | 24949885 | + | - |
| mmu-mir-7665 | MI0025005 | 3 | 2 | 119847998 | 119848060 | + | High |
| mmu-mir-7666 | MI0025006 | 21 | 8 | 40760916 | 40760970 | - | - |
| mmu-mir-7667 | MI0025007 | 12 | 17 | 29814512 | 29814574 | + | Medium |
| mmu-mir-7668 | MI0025008 | 12 | 7 | 29605934 | 29605992 | + | High |
| mmu-mir-7669 | MI0025009 | 18 | 3 | 89918460 | 89918517 | - | Medium |
| mmu-mir-7670 | MI0025010 | 11 | 6 | 38484260 | 38484328 | + | Medium |
| mmu-mir-7671 | MI0025011 | 5 | 11 | 53654424 | 53654481 | - | Medium |
| mmu-mir-7672 | MI0025012 | 6 | 14 | 26390702 | 26390763 | - | Medium |
| mmu-mir-7673 | MI0025013 | 5 | X | 93318180 | 93318243 | + | High |
| mmu-mir-3569 | MI0025014 | 5 | 7 | 30288805 | 30288862 | + | Medium |
| mmu-mir-7674 | MI0025015 | 5 | 2 | 31940958 | 31941020 | + | High |
| mmu-mir-7675 | MI0025016 | 6 | 12 | 11349888 | 11349945 | + | Medium |
| mmu-mir-7676-1 | MI0025017 | 20 | 15 | 78168988 | 78169049 | - | High |
| mmu-mir-7676-2 | MI0025018 | 20 | 15 | 78232799 | 78232860 | + | High |
| mmu-mir-129b | MI0025019 | 9 | 2 | 94071723 | 94071787 | + | Medium |
| mmu-mir-292b | MI0025020 | 7 | 7 | 3267872 | 3267933 | - | High |
| mmu-mir-1191b | MI0025021 | 7 | 10 | 81252074 | 81252131 | - | Medium |
| mmu-mir-7677 | MI0025022 | 1 | 17 | 27310219 | 27310285 | + | - |
| mmu-mir-7678 | MI0025023 | 2 | 2 | 164196233 | 164196303 | - | - |
| mmu-mir-7679 | MI0025024 | 7 | 11 | 82875829 | 82875891 | - | Medium |
| mmu-mir-7680 | MI0025025 | 33 | 16 | 21074763 | 21074816 | - | - |
| mmu-mir-6715 | MI0025026 | 3 | 19 | 55181110 | 55181166 | + | High |
| mmu-mir-3620 | MI0025027 | 48 | X | 149330381 | 149330441 | - | - |
| mmu-mir-465d | MI0025028 | 71 | X | 65866262 | 65866319 | - | High |
| mmu-mir-7681 | MI0025029 | 17 | 1 | 53888583 | 53888654 | + | High |
| mmu-mir-7682 | MI0025030 | 16 | 1 | 151318144 | 151318201 | + | - |
| mmu-mir-7683 | MI0025031 | 30 | 1 | 171469408 | 171469468 | - | High |
| mmu-mir-216c | MI0025032 | 4 | 11 | 28696198 | 28696266 | - | - |
| mmu-mir-7684 | MI0025033 | 3 | 15 | 82278120 | 82278179 | - | - |
| mmu-mir-219c | MI0025034 | 11 | 17 | 34243986 | 34244045 | + | Medium |
| mmu-mir-126b | MI0025035 | 10 | 2 | 26481375 | 26481432 | - | Medium |
| mmu-mir-7685 | MI0025036 | 13 | 2 | 158085424 | 158085485 | - | - |
| mmu-mir-7686 | MI0025037 | 50 | 7 | 139537479 | 139537535 | - | Medium |
| mmu-mir-290b | MI0025038 | 24 | 7 | 3267312 | 3267369 | - | Medium |
| mmu-mir-7687 | MI0025039 | 10 | 8 | 121265435 | 121265493 | + | High |
| mmu-mir-1258 | MI0025040 | 9 | 18 | 56671211 | 56671270 | + | - |
| mmu-mir-7688 | MI0025041 | 9 | 10 | 93268969 | 93269024 | + | - |
| mmu-mir-7689 | MI0025042 | 23 | 5 | 36458914 | 36458972 | + | - |
| rno-mir-451 | MI0001731 | 441 | chr10 | 65291204 | 65291275 | - | High |
| mmu-mir-5102 | MI0018010 | 270 | None | None | Low | ||
| mmu-mir-5109 | MI0018018 | 412 | None | None | Low | ||
| mmu-mir-5105 | MI0018013 | 1525 | None | None | Low | ||
| mmu-mir-2182 | MI0010832 | 349 | None | None | Low | ||
| mmu-mir-5115 | MI0018024 | 86 | None | None | Low | ||
| mmu-mir-1983 | MI0009990 | 380 | 13 | 22081088 | 22081219 | - | Medium |
| mmu-mir-5097 | MI0018005 | 139 | None | None | Low | ||
| mmu-mir-3096 | MI0014089 | 196 | None | None | Low | ||
| mmu-mir-5117 | MI0018026 | 367 | None | None | Low | ||
| mmu-mir-3096b | MI0016969 | 226 | None | None | Low | ||
| mmu-mir-720 | MI0004678 | None | None | None | Low | ||
| mmu-mir-3062 | MI0014024 | 15 | 11 | 68881400 | 68881504 | - | - |
| mmu-mir-1965 | MI0009962 | 489 | None | None | Low |