miRBase entry: mmu-mir-292b

Stem-loop mmu-mir-292b


Accession
MI0025020
Symbol
MGI: Mir292b
Description
Mus musculus mmu-mir-292b precursor miRNA

Literature search
17 open access papers mention mmu-mir-292b
(161 sentences)

Sequence

49007 reads, 7 reads per million, 59 experiments
ACUCAAAACCUGGCGGCACUUUUcuuccgaugaaaauccaaAAGAGCCCCCAGUUUGAGUAU
(((((((..((((.(((.(((((.....(((....))).))))).))).)))))))))))..

Structure
--       AC    C   A     cuucc   g 
  ACUCAAA  CUGG GGC CUUUU     gau a
  |||||||  |||| ||| |||||     |||  
  UGAGUUU  GACC CCG GAAaa     cua a
UA       --    C   A     ----c   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 3219198-3219259 [-]
Clustered miRNAs
8 other miRNAs are < 10 kb from mmu-mir-292b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-292b-5p

Accession MIMAT0029864
Description Mus musculus mmu-miR-292b-5p mature miRNA
Sequence 1 - ACUCAAAACCUGGCGGCACUUUU - 23
Evidence experimental
RNAseq [1]

Mature mmu-miR-292b-3p

Accession MIMAT0029865
Description Mus musculus mmu-miR-292b-3p mature miRNA
Sequence 42 - AAGAGCCCCCAGUUUGAGUAU - 62
Evidence experimental
RNAseq [1]

References

  1. PubMed ID: 23325850
    Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    "Castellano L, Stebbing J"
    "Nucleic Acids Res (2013) 41:3339-3351