Stem-loop mmu-mir-219c

Accession

MI0025034

Symbol

MGI: Mir219c

Description

Mus musculus mmu-mir-219c precursor miRNA

Literature search

47 open access papers mention mmu-mir-219c
(462 sentences)

Sequence

375 reads, 1 reads per million, 66 experiments

GGACGUCCAGACGCAACUCUCGgccggagccagagacuCGAGAAUUGCGUUUGGACAAUC
....((((((((((((.(((((((....)))........)))).))))))))))))....

Structure

GGAC            C    --------   c 
    GUCCAGACGCAA UCUC        Ggc g
    |||||||||||| ||||        |||  
    CAGGUUUGCGUU AGAG        ccg g
CUAA            A    Cucagaga   a 

Annotation confidence Not enough data

Genome context

chr17: 34025012-34025071 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-219c

Mature mmu-miR-219c-5p

• Accession: MIMAT0029892
• Description: Mus musculus mmu-miR-219c-5p mature miRNA
• Sequence: 1 - GGACGUCCAGACGCAACUCUCG - 22
• Evidence: experimental ; RNAseq [1]

Mature mmu-miR-219c-3p

• Accession: MIMAT0029893
• Description: Mus musculus mmu-miR-219c-3p mature miRNA
• Sequence: 39 - CGAGAAUUGCGUUUGGACAAUC - 60
• Evidence: experimental ; RNAseq [1]

References

1. PubMed ID: 23325850
   Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
   "Castellano L, Stebbing J"
   "Nucleic Acids Res (2013) 41:3339-3351