miRBase entry: mmu-mir-7689

Stem-loop mmu-mir-7689


Accession
MI0025042
Symbol
MGI: Mir7689
Description
Mus musculus mmu-mir-7689 precursor miRNA

Literature search
1 open access papers mention mmu-mir-7689
(4 sentences)

Sequence

1246 reads, 13.0 reads per million, 73 experiments
CCGAGGCAGCCUGGCUUAGuggaaaaggaacaggcuUUAGAGCCAGACUGCCUGGGUUU
((.((((((.((((((((((.............)))...))))))).)))))).))...

Structure
---  G      C       ---   ggaaa 
   CC AGGCAG CUGGCUU   AGu     a
   || |||||| |||||||   |||     g
   GG UCCGUC GACCGAG   ucg     g
UUU  G      A       AUU   gacaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
5: 36458914-36458972 [+]

Database links

Mature mmu-miR-7689-5p

Accession MIMAT0029908
Description Mus musculus mmu-miR-7689-5p mature miRNA
Sequence 1 - CCGAGGCAGCCUGGCUUAG - 19
Evidence experimental
RNAseq [1]

Mature mmu-miR-7689-3p

Accession MIMAT0029909
Description Mus musculus mmu-miR-7689-3p mature miRNA
Sequence 37 - UUAGAGCCAGACUGCCUGGGUUU - 59
Evidence experimental
RNAseq [1]

References

  1. PubMed ID: 23325850
    Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    "Castellano L, Stebbing J"
    "Nucleic Acids Res (2013) 41:3339-3351