Stem-loop pmi-mir-200

Accession

MI0025113

Description

Patiria miniata pmi-mir-200 precursor miRNA

Literature search

1 open access papers mention pmi-mir-200
(1 sentences)

Sequence

guggCAUCAUACCGGACAGCAUUAGAcguggcgaucagcgggcucUAAUACUGUCUGGUAAUGAUGUuaaugguguucagagaugca
.((((((((((((((((((.((((((..(.((.....)).)..)))))).))))))))).)))))))))...(((((....))))).

Structure

-----------------g         -         C      cg g  g 
                  uggCAUCAU ACCGGACAG AUUAGA  u gc a
                  ||||||||| ||||||||| ||||||  | || u
                  auUGUAGUA UGGUCUGUC UAAUcu  g cg c
acguagagacuuguggua         A         A      cg g  a 

Annotation confidence Low

Genome context

Unknown

Mature pmi-miR-200-5p

• Accession: MIMAT0032165
• Description: Patiria miniata pmi-miR-200-5p mature miRNA
• Sequence: 5 - CAUCAUACCGGACAGCAUUAGA - 26
• Evidence: not_experimental

Mature pmi-miR-200-3p

• Accession: MIMAT0032166
• Description: Patiria miniata pmi-miR-200-3p mature miRNA
• Sequence: 46 - UAAUACUGUCUGGUAAUGAUGU - 67
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374