Stem-loop pmi-mir-2001

Accession

MI0025122

Description

Patiria miniata pmi-mir-2001 precursor miRNA

Literature search

1 open access papers mention pmi-mir-2001
(1 sentences)

Sequence

auugucaguuucguuuAUGUGACCGUUACAAUGGGCAUguuauauccuaaaaaugcccgcugcaacguucacaacaacgggcaugaccag
...((((..((((((..(((((.((((.((.(((((((..............))))))).)).)))).)))))..))))))..))))...

Structure

auu    gu      uA     C    A  A       guuaua 
   guca  uucguu  UGUGA CGUU CA UGGGCAU      u
   ||||  ||||||  ||||| |||| || |||||||       
   cagu  gggcaa  acacu gcaa gu gcccgua      c
gac    ac      ca     u    c  c       aaaauc 

Annotation confidence Low

Genome context

Unknown

Mature pmi-miR-2001-5p

• Accession: MIMAT0032175
• Description: Patiria miniata pmi-miR-2001-5p mature miRNA
• Sequence: 17 - AUGUGACCGUUACAAUGGGCAU - 38
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374