Stem-loop pmi-mir-2006

Accession

MI0025126

Description

Patiria miniata pmi-mir-2006 precursor miRNA

Sequence

auagcacgugacaugugaCAUCGCCACCAGGUGUACUUCAguuaaauaccaaaaucuGAGCACACUUGGUAGCGGUGCCUuaagucauua
.......(((((.((.(.((((((.(((((((((.((.(((..............))))).))))))))).)))))).).)).)))))..

Structure

auagcac     a  u a      C         A  U   uuaaau 
       gugac ug g CAUCGC ACCAGGUGU CU CAg      a
       ||||| || | |||||| ||||||||| || |||       
       uacug au C GUGGCG UGGUUCACA GA Guc      c
-----au     a  U C      A         C  -   uaaaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature pmi-miR-2006-5p

• Accession: MIMAT0032179
• Description: Patiria miniata pmi-miR-2006-5p mature miRNA
• Sequence: 19 - CAUCGCCACCAGGUGUACUUCA - 40
• Evidence: not_experimental

Mature pmi-miR-2006-3p

• Accession: MIMAT0032180
• Description: Patiria miniata pmi-miR-2006-3p mature miRNA
• Sequence: 58 - GAGCACACUUGGUAGCGGUGCCU - 80
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374