Stem-loop pmi-mir-2007

Accession

MI0025127

Description

Patiria miniata pmi-mir-2007 precursor miRNA

Literature search

1 open access papers mention pmi-mir-2007
(1 sentences)

Sequence

cgccauggcagcgcugcugUAUUUCAGGCGGUAUACUGGUAAcagcuuauaugcagaguuuaccaguuacuucuuggaauauagggacgcuugucuuaacg
......(((((((.(.((((((((((((.((((.((((((((..((((.......)))))))))))))))).)))))))))))).).))).))))......

Structure

cgccau    -   c g            C    U        ca    au 
      ggca gcg u cugUAUUUCAGG GGUA ACUGGUAA  gcuu  a
      |||| ||| | |||||||||||| |||| ||||||||  ||||  u
      cugu cgc g gauauaagguuc ucau ugaccauu  ugag  g
gcaauu    u   a g            u    -        --    ac 

Annotation confidence Low

Genome context

Unknown

Mature pmi-miR-2007-5p

• Accession: MIMAT0032181
• Description: Patiria miniata pmi-miR-2007-5p mature miRNA
• Sequence: 20 - UAUUUCAGGCGGUAUACUGGUAA - 42
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374