miRBase entry: pmi-mir-2008

Stem-loop pmi-mir-2008


Accession
MI0025128
Description
Patiria miniata pmi-mir-2008 precursor miRNA

Literature search
1 open access papers mention pmi-mir-2008
(8 sentences)

Sequence

ccaucuuuuaccccguauuaacacugcggcugaugagggcuguuaaaccaaccaUCAGCCUCGCUGUCAAUACGAgguaagggcugaca
.((.((((((((.((((((.(((.((.((((((((.((.........))...)))))))).)).))).)))))).)))))))).))...

Structure
--c  u        c      a   c  c        --a  gcu 
   ca cuuuuacc cguauu aca ug ggcugaug   gg   g
   || |||||||| |||||| ||| || ||||||||   ||   u
   gu gggaaugg GCAUAA UGU GC CCGACUac   cc   u
aca  c        A      C   C  U        caa  aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pmi-miR-2008-3p

Accession MIMAT0032182
Description Patiria miniata pmi-miR-2008-3p mature miRNA
Sequence 55 - UCAGCCUCGCUGUCAAUACGA - 75
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374