Stem-loop pmi-mir-2008

Accession

MI0025128

Description

Patiria miniata pmi-mir-2008 precursor miRNA

Literature search

1 open access papers mention pmi-mir-2008
(8 sentences)

Sequence

ccaucuuuuaccccguauuaacacugcggcugaugagggcuguuaaaccaaccaUCAGCCUCGCUGUCAAUACGAgguaagggcugaca
.((.((((((((.((((((.(((.((.((((((((.((.........))...)))))))).)).))).)))))).)))))))).))...

Structure

--c  u        c      a   c  c        --a  gcu 
   ca cuuuuacc cguauu aca ug ggcugaug   gg   g
   || |||||||| |||||| ||| || ||||||||   ||   u
   gu gggaaugg GCAUAA UGU GC CCGACUac   cc   u
aca  c        A      C   C  U        caa  aaa 

Annotation confidence Low

Genome context

Unknown

Mature pmi-miR-2008-3p

• Accession: MIMAT0032182
• Description: Patiria miniata pmi-miR-2008-3p mature miRNA
• Sequence: 55 - UCAGCCUCGCUGUCAAUACGA - 75
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374