Stem-loop pmi-mir-2011

Accession

MI0025131

Description

Patiria miniata pmi-mir-2011 precursor miRNA

Literature search

1 open access papers mention pmi-mir-2011
(1 sentences)

Sequence

uagacuugugcggugCAGUCACUAUCACACCUUAGGugugucaguauuuccaggucaCCAAGGUGUGUUAGUGAUGACAcugcgcaaagucc
..(((((((((((((..(((((((.((((((((.((((.................)))))))))))).)))))))..)))))))).))))).

Structure

ua     -        CA       U        A    ugucagu 
  gacuu gugcggug  GUCACUA CACACCUU GGug       a
  ||||| ||||||||  ||||||| |||||||| ||||       u
  cugaa cgcgucAC  UAGUGAU GUGUGGAA CCac       u
-c     a        AG       U        -    uggaccu 

Annotation confidence Low

Genome context

Unknown

Mature pmi-miR-2011-5p

• Accession: MIMAT0032185
• Description: Patiria miniata pmi-miR-2011-5p mature miRNA
• Sequence: 16 - CAGUCACUAUCACACCUUAGG - 36
• Evidence: not_experimental

Mature pmi-miR-2011-3p

• Accession: MIMAT0032186
• Description: Patiria miniata pmi-miR-2011-3p mature miRNA
• Sequence: 58 - CCAAGGUGUGUUAGUGAUGACA - 79
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374