miRBase entry: lva-mir-219

Stem-loop lva-mir-219


Accession
MI0025161
Description
Lytechinus variegatus lva-mir-219 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

ugcgaguguuauccguUGAUUGUCCGAACGCAAUUCUUGuugacuuuucauucacaaucaagaacuguguacggacaucagugguugauaccgcuuacacc
.(((.((((((.((((((((.(((((.(((((.(((((((((............))).)))))).))))).))))))))))))).))))))))).......

Structure
------u   a      u        U     A     A      -   acuuu 
       gcg guguua ccguUGAU GUCCG ACGCA UUCUUG uug     u
       ||| |||||| |||||||| ||||| ||||| |||||| |||      
       cgc cauagu ggugacua caggc ugugu aagaac aac     c
ccacauu   -      u        -     a     c      u   acuua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-miR-219-5p

Accession MIMAT0032215
Description Lytechinus variegatus lva-miR-219-5p mature miRNA
Sequence 17 - UGAUUGUCCGAACGCAAUUCUUG - 39
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374