Stem-loop lva-mir-242

Accession

MI0025162

Description

Lytechinus variegatus lva-mir-242 precursor miRNA

Sequence

guaaaaccaugucgggggUUGCGUAGGCGUUGUGCACAGUguuccuucaccuuacaauugugcaucucauccacgcaaaucacggcacuggucacaaa
.....(((((((((.((.((((((.((.(..(((((((((((...........)).)))))))))..).)).)))))).)).))))).))))......

Structure

-guaaa    -     g  g      A  C UU         -  uccu 
      acca ugucg gg UUGCGU GG G  GUGCACAGU gu    u
      |||| ||||| || |||||| || |  ||||||||| ||    c
      uggu acggc cu aacgca cu c  uacguguua ca    a
aaacac    c     a  a      c  a uc         a  uucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-242-5p

• Accession: MIMAT0032216
• Description: Lytechinus variegatus lva-miR-242-5p mature miRNA
• Sequence: 19 - UUGCGUAGGCGUUGUGCACAGU - 40
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374