Stem-loop lva-mir-2005

Accession

MI0025172

Description

Lytechinus variegatus lva-mir-2005 precursor miRNA

Sequence

gucaaucucuggugcAGUCCAAUAGGGAGGGCAUUGCAGgugauauuugaaagcccugcaguggcuccuauuggucaauaccagaugauugacauc
((((((((((((((..(.((((((((..((.(((((((((.(...........)))))))))).)))))))))).)..))))))).)))))))...

Structure

---       -       cA U        GA  G         u auau 
   gucaauc ucuggug  G CCAAUAGG  GG CAUUGCAGg g    u
   ||||||| |||||||  | ||||||||  || ||||||||| |    u
   caguuag agaccau  c gguuaucc  uc gugacgucc c    g
cua       u       aa u        --  g         - gaaa 

Annotation confidence Low

Genome context

Unknown

Mature lva-miR-2005-5p

• Accession: MIMAT0032226
• Description: Lytechinus variegatus lva-miR-2005-5p mature miRNA
• Sequence: 16 - AGUCCAAUAGGGAGGGCAUUGCAG - 39
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374