Stem-loop lva-mir-2008

Accession

MI0025175

Description

Lytechinus variegatus lva-mir-2008 precursor miRNA

Sequence

uucuccacuuucuaccccGUAUUAACAAUGUGGCUGAUGAggaaucuuaugaaccaucagccucgcugucaauacgagguaaggagugacaa
.....((((((.((((.((((((.(((.((.((((((((.(...((....)).))))))))).)).))).)))))).)))).))))))....

Structure

uucuc      c    c      A   A  U        A gaa  u 
     cacuuu uacc cGUAUU ACA UG GGCUGAUG g   uc u
     |||||| |||| |||||| ||| || |||||||| |   ||  
     gugagg augg gcauaa ugu gc ccgacuac c   ag a
-aaca      a    a      c   c  u        - --a  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-2008-5p

• Accession: MIMAT0032229
• Description: Lytechinus variegatus lva-miR-2008-5p mature miRNA
• Sequence: 19 - GUAUUAACAAUGUGGCUGAUGA - 40
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374