Stem-loop lva-mir-2009

Accession

MI0025176

Description

Lytechinus variegatus lva-mir-2009 precursor miRNA

Sequence

uccaauccucaguguucuuugguuuuuguggaacagcuccugugaauuuuauaagaccaUGAGUUGUCCCACAAAGAACACAgaucgcugugaaaca
.......(.(((((.(((.((.(((((((((.(((((((.((.(..((....))..))).))))))).))))))))).)).))).))))).).....

Structure

uccaauc u     u   u  g         a       c  u aa  u 
       c cagug ucu ug uuuuugugg acagcuc ug g  uu u
       | ||||| ||| || ||||||||| ||||||| || |  ||  
       g gucgc agA AC AGAAACACC UGUUGAG ac c  aa a
--acaaa u     u   C  A         C       U  - ag  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-2009-3p

• Accession: MIMAT0032230
• Description: Lytechinus variegatus lva-miR-2009-3p mature miRNA
• Sequence: 60 - UGAGUUGUCCCACAAAGAACACA - 82
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374